Horticulture Research

Volume 11, 2024

2026 2025 2024 2023 2022 2021 2020 2019 2018 2017 2016 2015 2014

Article|02 Oct 2024|OPEN

SlSTOP1-regulated SlHAK5 expression confers Al tolerance in tomato by facilitating citrate secretion from roots
Article|01 Oct 2024|OPEN

Fertility restorer gene CaRf and PepperSNP50K provide a promising breeding system for hybrid pepper
Article|09 Sep 2024|OPEN

Potassium stimulates fruit sugar accumulation by increasing carbon flow in Citrus sinensis
Article|09 Sep 2024|OPEN

Exploring genetic diversity, population structure, and subgenome differences in the allopolyploid Camelina sativa: implications for future breeding and research studies
Article|04 Sep 2024|OPEN

A low-cost dpMIG-seq method for elucidating complex inheritance in polysomic crops: a case study in tetraploid blueberry
Article|03 Sep 2024|OPEN

Inflorescence development in female cannabis plants is mediated by photoperiod and gibberellin
Article|30 Aug 2024|OPEN

Accumulation of dually targeted StGPT1 in chloroplasts mediated by StRFP1, an E3 ubiquitin ligase, enhances plant immunity
Article|30 Aug 2024|OPEN

CsSPX3-CsPHL7-CsGS1/CsTS1 module mediated Pi-regulated negatively theanine biosynthesis in tea (Camellia sinensis)
Article|30 Aug 2024|OPEN

Saline-alkali stress affects the accumulation of proanthocyanidins and sesquiterpenoids via the MYB5-ANR/TPS31 cascades in the rose petals
Article|21 Aug 2024|OPEN

CGD: a multi-omics database for Chrysanthemum genomic and biological research
Article|21 Aug 2024|OPEN

Unveiling pepper immunity’s robustness to temperature shifts: insights for empowering future crops
Article|21 Aug 2024|OPEN

Inference of the genetic basis of fruit texture in highbush blueberries using genome-wide association analyses
Article|20 Aug 2024|OPEN

Spatial transcriptome analysis reveals de novo regeneration of poplar roots
Article|14 Aug 2024|OPEN

Histone deacetylase SlHDA7 impacts fruit ripening and shelf life in tomato
Article|14 Aug 2024|OPEN

Genotype-associated core bacteria enhance host resistance against kiwifruit bacterial canker
Article|14 Aug 2024|OPEN

CsTs, a C-type lectin receptor-like kinase, regulates the development trichome development and cuticle metabolism in cucumber (Cucumis sativus)
Letter to the Editor|12 Aug 2024|OPEN

HortDB V1.0: a genomic database of horticultural plants
Article|12 Aug 2024|OPEN

Fine mapping and identification of candidate genes associated with powdery mildew resistance in melon (Cucumis melo L.)
Article|12 Aug 2024|OPEN

Genome-wide association study identifies the genetic basis of key agronomic traits in 207 sugar beet accessions
Review Article|12 Aug 2024|OPEN

Floral volatile benzenoids/phenylpropanoids: biosynthetic pathway, regulation and ecological value
Corrigendum|10 Aug 2024|OPEN

Correction to: Regulatory interaction of BcWRKY33A and BcHSFA4A promotes salt tolerance in non-heading Chinese cabbage [Brassica campestris (syn. Brassica rapa) ssp. chinensis]
Corrigendum|10 Aug 2024|OPEN

Correction to: A mutation in the brassinosteroid biosynthesis gene CpDWF5 disrupts vegetative and reproductive development and the salt stress response in squash (Cucurbita pepo)
Review Article|09 Aug 2024|OPEN

Ethylene in fruits: beyond ripening control
Letter to the Editor|09 Aug 2024|OPEN

A small secreted protein serves as a plant-derived effector mediating symbiosis between Populus and Laccaria bicolor
Article|09 Aug 2024|OPEN

Morphological and genetic characterization of the muscadine fruit abscission zone
Article|09 Aug 2024|OPEN

The transcription factor MYC2 positively regulates terpene trilactone biosynthesis through activating GbGGPPS expression in Ginkgo biloba
Article|09 Aug 2024|OPEN

Salicylic acid improves chilling tolerance via CsNPR1–CsICE1 interaction in grafted cucumbers
Article|08 Aug 2024|OPEN

ABIOTIC STRESS GENE 1 mediates aroma volatiles accumulation by activating MdLOX1a in apple
Article|08 Aug 2024|OPEN

Interference of skeleton photoperiod in circadian clock and photosynthetic efficiency of tea plant: in-depth analysis of mathematical model
Review Article|06 Aug 2024|OPEN

The art of tartness: the genetics of organic acid content in fresh fruits
Article|06 Aug 2024|OPEN

CaMYB80 enhances the cold tolerance of pepper by directly targeting CaPOA1
Article|03 Aug 2024|OPEN

Visualization of metabolite distribution based on matrix-assisted laser desorption/ionization–mass spectrometry imaging of tea seedlings (Camellia sinensis)
Article|03 Aug 2024|OPEN

Discovery of bifunctional diterpene cyclases/synthases in bacteria supports a bacterial origin for the plant terpene synthase gene family
Mini Review|31 Jul 2024|OPEN

Auxin response factors: important keys for understanding regulatory mechanisms of fleshy fruit development and ripening
Article|30 Jul 2024|OPEN

Chromosome-scale reference genome of an ancient landrace: unveiling the genetic basis of seed weight in the food legume crop pigeonpea (Cajanus cajan)
Article|30 Jul 2024|OPEN

A genome assembly of decaploid Houttuynia cordata provides insights into the evolution of Houttuynia and the biosynthesis of alkaloids
Article|30 Jul 2024|OPEN

Nitrogen reduces calcium availability by promoting oxalate biosynthesis in apple leaves
Article|30 Jul 2024|OPEN

Transcription factors LvBBX24 and LvbZIP44 coordinated anthocyanin accumulation in response to light in lily petals
Article|30 Jul 2024|OPEN

PpBBX32 and PpZAT5 modulate temperature-dependent and tissue-specific anthocyanin accumulation in peach fruit
Article|30 Jul 2024|OPEN

Light stress elicits soilborne disease suppression mediated by root-secreted flavonoids in Panax notoginseng
Article|30 Jul 2024|OPEN

Single-cell transcriptomic analysis of flowering regulation and vernalization in Chinese cabbage shoot apex
Article|30 Jul 2024|OPEN

Orphan gene BR2 positively regulates bolting resistance through the vernalization pathway in Chinese cabbage
Perspective|27 Jul 2024|OPEN

Deploying deep Solanaceae domestication and virus biotechnology knowledge to enhance food system performance and diversity
Article|26 Jul 2024|OPEN

Improvement and application of vacuum-infiltration system in tomato
Article|26 Jul 2024|OPEN

Local and systemic transcriptome and spliceome reprogramming induced by the root-knot nematode Meloidogyne incognita in tomato
Review Article|26 Jul 2024|OPEN

Is ATP a signaling regulator for postharvest chilling tolerance in fruits?
Article|24 Jul 2024|OPEN

Integrating QTL mapping and transcriptomics to decipher the genetic architecture of sterol metabolism in Brassica napus L
Article|24 Jul 2024|OPEN

Full-length transcriptome sequencing of pepper fruit during development and construction of a transcript variation database
Article|24 Jul 2024|OPEN

Abscisic acid regulates Cl− efflux via the ABI5-ZAT10-SLAH3 module in chloride-stressed Malus hupehensis
Article|24 Jul 2024|OPEN

Mutation of YFT3, an isomerase in the isoprenoid biosynthetic pathway, impairs its catalytic activity and carotenoid accumulation in tomato fruit
Article|22 Jul 2024|OPEN

Fruit ripening and postharvest changes in very early–harvested tomatoes
Article|21 Jul 2024|OPEN

SlDELLA interacts with SlPIF4 to regulate arbuscular mycorrhizal symbiosis and phosphate uptake in tomato
Article|15 Jul 2024|OPEN

Restorer of fertility like 30, encoding a mitochondrion-localized pentatricopeptide repeat protein, regulates wood formation in poplar
Article|12 Jul 2024|OPEN

Haplotype-resolved genome and mapping of freezing tolerance in the wild potato Solanum commersonii
Article|12 Jul 2024|OPEN

Siderophore interactions drive the ability of Pseudomonas spp. consortia to protect tomato against Ralstonia solanacearum
Article|12 Jul 2024|OPEN

Phospholipid production and signaling by a plant defense inducer against Podosphaera xanthii is genotype-dependent
Article|11 Jul 2024|OPEN

Sorbitol mediates age-dependent changes in apple plant growth strategy through gibberellin signaling
Article|11 Jul 2024|OPEN

The tomato WRKY-B transcription factor modulates lateral branching by targeting BLIND, PIN4, and IAA15
Article|11 Jul 2024|OPEN

Genomic data provides insights into the evolutionary history and adaptive differentiation of two tetraploid strawberries
Review Article|10 Jul 2024|OPEN

Small molecules, enormous functions: potential approach for overcoming bottlenecks in embryogenic tissue induction and maintenance in conifers
Article|10 Jul 2024|OPEN

Dynamic temporal transcriptome analysis reveals grape VlMYB59-VlCKX4 regulatory module controls fruit set
Article|10 Jul 2024|OPEN

SlTrxh functions downstream of SlMYB86 and positively regulates nitrate stress tolerance via S-nitrosation in tomato seedling
Article|10 Jul 2024|OPEN

The gap-free genome of Forsythia suspensa illuminates the intricate landscape of centromeres
Article|10 Jul 2024|OPEN

Development of super-infective ternary vector systems for enhancing the Agrobacterium-mediated plant transformation and genome editing efficiency
Article|10 Jul 2024|OPEN

Single-cell RNA sequencing reveals a high-resolution cell atlas of petals in Prunus mume at different flowering development stages
Article|10 Jul 2024|OPEN

Association analysis of BSA-seq, BSR-seq, and RNA-seq reveals key genes involved in purple leaf formation in a tea population (Camellia sinensis)
Review Article|10 Jul 2024|OPEN

Grapevine gray mold disease: infection, defense and management
Article|08 Jul 2024|OPEN

Genomic prediction and genome-wide association study using combined genotypic data from different genotyping systems: application to apple fruit quality traits
Article|08 Jul 2024|OPEN

Haplotype-resolved genome assembly for tetraploid Chinese cherry (Prunus pseudocerasus) offers insights into fruit firmness
Article|02 Jul 2024|OPEN

Panax notoginseng: panoramagram of phytochemical and pharmacological properties, biosynthesis, and regulation and production of ginsenosides
Review Article|02 Jul 2024|OPEN

Relevance and regulation of alternative splicing in plant secondary metabolism: current understanding and future directions
Article|01 Jul 2024|OPEN

Genomic diversity, population structure, and genome-wide association reveal genetic differentiation and trait improvements in mango
Article|27 Jun 2024|OPEN

CsPHRs-CsJAZ3 incorporates phosphate signaling and jasmonate pathway to regulate catechin biosynthesis in Camellia sinensis
Article|27 Jun 2024|OPEN

Tracing the color: quantitative trait loci analysis reveals new insights into red-flesh pigmentation in apple (Malus domestica)
Article|27 Jun 2024|OPEN

Integrated transcriptome and metabolome reveal that SlSYTA modulates ROS responses driving resistance defense in Solanum lycopersicum
Article|27 Jun 2024|OPEN

The gap-free genome and multi-omics analysis of Citrus reticulata ‘Chachi’ reveal the dynamics of fruit flavonoid biosynthesis
Letter to the Editor|27 Jun 2024|OPEN

Magnetofected pollen gene delivery system could generate genetically modified Cucumis sativus
Article|25 Jun 2024|OPEN

A nested reciprocal experimental design to map the genetic architecture of transgenerational phenotypic plasticity
Letter to the Editor|24 Jun 2024|OPEN

Integrated multi-omics profiling reveals a landscape of dramatic metabolic defect in Artemisia annua
Article|21 Jun 2024|OPEN

BcSRC2 interacts with BcAPX4 to increase ascorbic acid content for responding ABA signaling and drought stress in pak choi
Article|21 Jun 2024|OPEN

Genome resequencing reveals the genetic basis of population evolution, local adaptation, and rewiring of the rhizome metabolome in Atractylodes lancea
Article|21 Jun 2024|OPEN

The gapless genome assembly and multi-omics analyses unveil a pivotal regulatory mechanism of oil biosynthesis in the olive tree
Article|20 Jun 2024|OPEN

Stem lodging Resistance-1 controls stem strength by positively regulating the biosynthesis of cell wall components in Capsicum annuum L.
Review Article|20 Jun 2024|OPEN

Advances in understanding the graft healing mechanism: a review of factors and regulatory pathways
Article|19 Jun 2024|OPEN

Chemical induction of DNA demethylation by 5-Azacytidine enhances tomato fruit defense against gray mold through dicer-like protein DCL2c
Article|18 Jun 2024|OPEN

The jacktree genome and population genomics provides insights for the mechanisms of the germination obstacle and the conservation of endangered ornamental plants
Article|14 Jun 2024|OPEN

The WUSCHEL-related homeobox transcription factor CsWOX3 negatively regulates fruit spine morphogenesis in cucumber (Cucumis sativus L.)
Article|12 Jun 2024|OPEN

CsMIKC1 regulates inflorescence development and grain production in Cannabis sativa plants
Article|12 Jun 2024|OPEN

Ralstonia solanacearum type III effector RipAF1 mediates plant resistance signaling by ADP-ribosylation of host FBN1
Letter to the Editor|07 Jun 2024|OPEN

The evolutionary significance of whole genome duplications in oil biosynthesis of oil crops
Article|07 Jun 2024|OPEN

MiR319a-mediated salt stress response in poplar
Article|07 Jun 2024|OPEN

Dynamic histone modification signatures coordinate developmental programs in strawberry fruit ripening
Article|07 Jun 2024|OPEN

MdVQ17 negatively regulates apple resistance to Glomerella leaf spot by promoting MdWRKY17-mediated salicylic acid degradation and pectin lyase activity
Article|07 Jun 2024|OPEN

Advancing PAM-less genome editing in soybean using CRISPR-SpRY
Retraction|03 Jun 2024|OPEN

Retraction of: Lipidomics, transcription analysis, and hormone profiling unveil the role of CsLOX6 in MeJA biosynthesis during black tea processing
Article|03 Jun 2024|OPEN

Metabolome profiling and transcriptome analysis unveiling the crucial role of magnesium transport system for magnesium homeostasis in tea plants
Article|03 Jun 2024|OPEN

A novel tomato interspecific (Solanum lycopersicum var. cerasiforme and Solanum pimpinellifolium) MAGIC population facilitates trait association and candidate gene discovery in untapped exotic germplasm
Article|03 Jun 2024|OPEN

A simple and efficient gene functional analysis method for studying the growth and development of peach seedlings
Article|28 May 2024|OPEN

A CRISPR/Cas9-induced male-sterile line facilitating easy hybrid production in polyploid rapeseed (Brassica napus)
Article|28 May 2024|OPEN

New insights into the evolution and local adaptation of the genus Castanea in east Asia
Article|28 May 2024|OPEN

JrPHL8-JrWRKY4-JrSTH2L module regulates resistance to Colletotrichum gloeosporioides in walnut
Article|28 May 2024|OPEN

Chloroplast protein StFC-II was manipulated by a Phytophthora effector to enhance host susceptibility
Article|28 May 2024|OPEN

MIKC type MADS-box transcription factor LcSVP2 is involved in dormancy regulation of the terminal buds in evergreen perennial litchi (Litchi chinensis Sonn.)
Article|28 May 2024|OPEN

Spearmint targets microtubules by (−)-carvone
Article|24 May 2024|OPEN

Functional data analysis-based yield modeling in year-round crop cultivation
Article|24 May 2024|OPEN

JrGA20ox1-transformed rootstocks deliver drought response signals to wild-type scions in grafted walnut
Article|24 May 2024|OPEN

In vivo and ex vivo study on cell wall components as part of the network in tomato fruit during the ripening process
Article|20 May 2024|OPEN

Integrated multi-omics investigation revealed the importance of phenylpropanoid metabolism in the defense response of Lilium regale Wilson to fusarium wilt
Article|18 May 2024|OPEN

Genome assembly and resequencing shed light on evolution, population selection, and sex identification in Vernicia montana
Article|14 May 2024|OPEN

Exploration of a European-centered strawberry diversity panel provides markers and candidate genes for the control of fruit quality traits
Article|14 May 2024|OPEN

Genetic and epigenetic signatures for improved breeding of cultivated blueberry
Article|10 May 2024|OPEN

Sugar import mediated by sugar transporters and cell wall invertases for seed development in Camellia oleifera
Article|10 May 2024|OPEN

PE (Prickly Eggplant) encoding a cytokinin-activating enzyme responsible for the formation of prickles in eggplant
Article|10 May 2024|OPEN

Metagenome-enabled models improve genomic predictive ability and identification of herbivory-limiting genes in sweetpotato
Article|07 May 2024|OPEN

Characterization of the CsCENH3 protein and centromeric DNA profiles reveal the structures of centromeres in cucumber
Review Article|07 May 2024|OPEN

Biography of Vitis genomics: recent advances and prospective
Article|06 May 2024|OPEN

Evolutionarily conserved 12-oxophytodienoate reductase trans-lncRNA pair affects disease resistance in tea (Camellia sinensis) via the jasmonic acid signaling pathway
Article|06 May 2024|OPEN

CRISPR/Cas9 genome editing of potato StDMR6-1 results in plants less affected by different stress conditions
Article|05 May 2024|OPEN

The phosphorylation of a WD40-repeat protein negatively regulates flavonoid biosynthesis in Camellia sinensis under drought stress
Article|03 May 2024|OPEN

Evolutionary conservation of receptor compensation for stem cell homeostasis in Solanaceae plants
Article|03 May 2024|OPEN

Jasmonate enhances cold acclimation in jojoba by promoting flavonol synthesis
Article|01 May 2024|OPEN

Coping with alpine habitats: genomic insights into the adaptation strategies of Triplostegia glandulifera (Caprifoliaceae)
Article|26 Apr 2024|OPEN

De novo assembling a high-quality genome sequence of Amur grape (Vitis amurensis Rupr.) gives insight into Vitis divergence and sex determination
Article|26 Apr 2024|OPEN

Transposable elements in Rosaceae: insights into genome evolution, expression dynamics, and syntenic gene regulation
Article|26 Apr 2024|OPEN

Plants attacked above-ground by leaf-mining flies change below-ground microbiota to enhance plant defense
Article|25 Apr 2024|OPEN

Four novel Cit7GlcTs functional in flavonoid 7-O-glucoside biosynthesis are vital to flavonoid biosynthesis shunting in citrus
Article|25 Apr 2024|OPEN

AcMYB266, a key regulator of the red coloration in pineapple peel: a case of subfunctionalization in tandem duplicated genes
Article|23 Apr 2024|OPEN

Haplotype-resolved chromosomal-level genome assembly reveals regulatory variations in mulberry fruit anthocyanin content
Article|23 Apr 2024|OPEN

New citizen science initiative enhances flowering onset predictions for fruit trees in Great Britain
Letter to the Editor|23 Apr 2024|OPEN

Development of ABE and AKBE base editors in watermelon
Letter to the Editor|23 Apr 2024|OPEN

CRISPR/Cas9-mediated mutation of FERULATE 5-HYDROXYLASE enhances adsorption capacity of lignocellulose-based porous carbon from paper mulberry
Article|22 Apr 2024|OPEN

Identification of allelic relationship and translocation region among chromosomal translocation lines that leads to less-seed watermelon
Article|22 Apr 2024|OPEN

Cytochemical localization and synthesis mechanism of the glucomannan in pseudobulbs of Bletilla striata Reichb. f
Article|22 Apr 2024|OPEN

Chromosome-level genome assembly and population genomics reveals crucial selection for subgynoecy development in chieh-qua
Article|22 Apr 2024|OPEN

Comparative transcriptome and functional analyses provide insights into the key factors regulating shoot regeneration in highbush blueberry
Article|22 Apr 2024|OPEN

The transcription factor CpMYB62 controls the genetic network that leads to the determination of female flowers in Cucurbita pepo
Article|22 Apr 2024|OPEN

A telomere-to-telomere gap-free reference genome assembly of avocado provides useful resources for identifying genes related to fatty acid biosynthesis and disease resistance
Corrigendum|22 Apr 2024|OPEN

Correction to: Chromosome-level genome assembly and population genomics reveals crucial selection for subgynoecy development in chieh-qua
Article|16 Apr 2024|OPEN

Comparative population genomics reveals convergent and divergent selection in the apricot–peach–plum–mei complex
Article|16 Apr 2024|OPEN

Heterotrimeric Gα-subunit regulates flower and fruit development in CLAVATA signaling pathway in cucumber
Article|16 Apr 2024|OPEN

Enhancing tomato fruit antioxidant potential through hydrogen nanobubble irrigation
Corrigendum|13 Apr 2024|OPEN

Correction to: Dissecting the complex genetic basis of pre- and post-harvest traits in Vitis vinifera L. using genome-wide association studies
Article|11 Apr 2024|OPEN

Efficient purging of deleterious mutations contributes to the survival of a rare conifer
Article|09 Apr 2024|OPEN

Roles of the APETALA3–3 ortholog in the petal identity specification and morphological differentiation in Delphinium anthriscifolium flowers
Article|09 Apr 2024|OPEN

Regulatory role of Prunus mume DAM6 on lipid body accumulation and phytohormone metabolism in the dormant vegetative meristem
Article|09 Apr 2024|OPEN

BoaBZR1.1 mediates brassinosteroid-induced carotenoid biosynthesis in Chinese kale
Article|09 Apr 2024|OPEN

Genomic, transcriptomic, and metabolomic analyses provide insights into the evolution and development of a medicinal plant Saposhnikovia divaricata (Apiaceae)
Article|09 Apr 2024|OPEN

A phased genome of the highly heterozygous ‘Texas’ almond uncovers patterns of allele-specific expression linked to heterozygous structural variants
Article|09 Apr 2024|OPEN

Telomere-to-telomere reference genome for Panax ginseng highlights the evolution of saponin biosynthesis
Article|08 Apr 2024|OPEN

Haplotype-resolved genome of Prunus zhengheensis provides insight into its evolution and low temperature adaptation in apricot
Article|08 Apr 2024|OPEN

euAP2a, a key gene that regulates flowering time in peach (Prunus persica) by modulating thermo-responsive transcription programming
Article|08 Apr 2024|OPEN

HortGenome Search Engine, a universal genomic search engine for horticultural crops
Letter to the Editor|08 Apr 2024|OPEN

Specific chromatin states and m6A modifications are associated with mRNA mobility in planta
Article|04 Apr 2024|OPEN

SlGAD2 is the target of SlTHM27, positively regulates cold tolerance by mediating anthocyanin biosynthesis in tomato
Review Article|04 Apr 2024|OPEN

The critical roles of three sugar-related proteins (HXK, SnRK1, TOR) in regulating plant growth and stress responses
Article|02 Apr 2024|OPEN

Genome-wide transcriptome analysis reveals key regulatory networks and genes involved in the determination of seed hardness in vegetable soybean
Article|02 Apr 2024|OPEN

Nuclear factor Y-A3b binds to the SINGLE FLOWER TRUSS promoter and regulates flowering time in tomato
Article|02 Apr 2024|OPEN

Adaptive regulation of miRNAs/milRNAs in tissue-specific interaction between apple and Valsa mali
Article|01 Apr 2024|OPEN

Identification and characterization of two P450 enzymes from Citrus sinensis involved in TMTT and DMNT biosyntheses and Asian citrus psyllid defense
Article|30 Mar 2024|OPEN

The high-quality genome of Grona styracifolia uncovers the genomic mechanism of high levels of schaftoside, a promising drug candidate for treatment of COVID-19
Article|30 Mar 2024|OPEN

Pyrus betulaefolia ERF3 interacts with HsfC1a to coordinately regulate aquaporin PIP1;4 and NCED4 for drought tolerance
Article|28 Mar 2024|OPEN

Exploring salt tolerance mechanisms using machine learning for transcriptomic insights: case study in Spartina alterniflora
Article|28 Mar 2024|OPEN

The CsmiR397a-CsLAC17 module regulates lignin biosynthesis to balance the tenderness and gray blight resistance in young tea shoots
Article|28 Mar 2024|OPEN

Interaction among homeodomain transcription factors mediates ethylene biosynthesis during pear fruit ripening
Article|25 Mar 2024|OPEN

Calmodulin-like protein MdCML15 interacts with MdBT2 to modulate iron homeostasis in apple
Article|25 Mar 2024|OPEN

VvWRKY5 positively regulates wounding-induced anthocyanin accumulation in grape by interplaying with VvMYBA1 and promoting jasmonic acid biosynthesis
Article|25 Mar 2024|OPEN

Integrative analysis of the methylome and transcriptome of tomato fruit (Solanum lycopersicum L.) induced by postharvest handling
Article|18 Mar 2024|OPEN

Genome-wide variants and optimal allelic combinations for citric acid in tomato
Article|15 Mar 2024|OPEN

MdbZIP44–MdCPRF2-like–Mdα-GP2 regulate starch and sugar metabolism in apple under nitrogen supply
Article|14 Mar 2024|OPEN

Extracellular perception of multiple novel core effectors from the broad host-range pear anthracnose pathogen Colletotrichum fructicola in the nonhost Nicotiana benthamiana
Article|14 Mar 2024|OPEN

Chromosome-level genome assemblies of Musa ornata and Musa velutina provide insights into pericarp dehiscence and anthocyanin biosynthesis in banana
Article|14 Mar 2024|OPEN

Diploid genome assembly of the Malbec grapevine cultivar enables haplotype-aware analysis of transcriptomic differences underlying clonal phenotypic variation
Article|12 Mar 2024|OPEN

Integrated proteomic, transcriptomic, and metabolomic profiling reveals that the gibberellin–abscisic acid hub runs flower development in the Chinese orchid Cymbidium sinense
Article|08 Mar 2024|OPEN

Characterization of O-methyltransferases in the biosynthesis of phenylphenalenone phytoalexins based on the telomere-to-telomere gapless genome of Musella lasiocarpa
Article|07 Mar 2024|OPEN

Haplotype-resolved T2T reference genomes for wild and domesticated accessions shed new insights into the domestication of jujube
Article|07 Mar 2024|OPEN

CsEXL3 regulate mechanical harvest-related droopy leaves under the transcriptional activation of CsBES1.2 in tea plant
Article|06 Mar 2024|OPEN

MAPK20-mediated ATG6 phosphorylation is critical for pollen development in Solanum lycopersicum L.
Article|02 Mar 2024|OPEN

Chromosome-scale genome, together with transcriptome and metabolome, provides insights into the evolution and anthocyanin biosynthesis of Rubus rosaefolius Sm. (Rosaceae)
Article|02 Mar 2024|OPEN

CaSTH2 disables CaWRKY40 from activating pepper thermotolerance and immunity against Ralstonia solanacearum via physical interaction
Article|02 Mar 2024|OPEN

Harnessing the power of microbes: Enhancing soybean growth in an acidic soil through AMF inoculation rather than P-fertilization
Article|02 Mar 2024|OPEN

Multi-omics analysis reveals key regulatory defense pathways and genes involved in salt tolerance of rose plants
Article|28 Feb 2024|OPEN

Phosphorylation of birch BpNAC90 improves the activation of gene expression to confer drought tolerance
Article|28 Feb 2024|OPEN

Transcriptomic analyses to summarize gene expression patterns that occur during leaf initiation of Chinese cabbage
Article|28 Feb 2024|OPEN

Ethylene-responsive VviERF003 modulates glycosylated monoterpenoid synthesis by upregulating VviGT14 in grapes
Article|28 Feb 2024|OPEN

RNA-seq-based comparative transcriptome analysis reveals the role of CsPrx73 in waterlogging-triggered adventitious root formation in cucumber
Article|28 Feb 2024|OPEN

RNA sequencing analysis reveals PgbHLH28 as the key regulator in response to methyl jasmonate-induced saponin accumulation in Platycodon grandiflorus
Article|28 Feb 2024|OPEN

Pumpkin CmoDREB2A enhances salt tolerance of grafted cucumber through interaction with CmoNAC1 to regulate H2O2 and ABA signaling and K+/Na+ homeostasis
Article|28 Feb 2024|OPEN

Chromosome-scale reference genome of broccoli (Brassica oleracea var. italica Plenck) provides insights into glucosinolate biosynthesis
Article|26 Feb 2024|OPEN

Diversity of flavour characteristics of table grapes and their contributing volatile compounds analysed by the solvent-assisted flavour evaporation method
Article|23 Feb 2024|OPEN

MdARF3 switches the lateral root elongation to regulate dwarfing in apple plants
Article|23 Feb 2024|OPEN

PsmiR159b-PsMYB65 module functions in the resumption of bud growth after endodormancy by affecting the cell cycle in tree peony
Article|23 Feb 2024|OPEN

Banana MabHLH28 positively regulates the expression of softening-related genes to mediate fruit ripening independently or via cooperating with MaWRKY49/111
Article|23 Feb 2024|OPEN

Defensive alteration of root exudate composition by grafting Prunus sp. onto resistant rootstock contributes to reducing crown gall disease
Article|23 Feb 2024|OPEN

Auxin regulates bulbil initiation by mediating sucrose metabolism in Lilium lancifolium
Article|23 Feb 2024|OPEN

The Smi-miR858a-SmMYB module regulates tanshinone and phenolic acid biosynthesis in Salvia miltiorrhiza
Article|23 Feb 2024|OPEN

A natural variation in SlSCaBP8 promoter contributes to the loss of saline–alkaline tolerance during tomato improvement
Article|23 Feb 2024|OPEN

Genome-wide methylation, transcriptome and characteristic metabolites reveal the balance between diosgenin and brassinosteroids in Dioscorea zingiberensis
Review Article|23 Feb 2024|OPEN

Emerging roles and mechanisms of lncRNAs in fruit and vegetables
Article|22 Feb 2024|OPEN

Engineered dsRNA–protein nanoparticles for effective systemic gene silencing in plants
Article|22 Feb 2024|OPEN

cla-miR164-NO APICAL MERISTEM (ClNAM) regulates the inflorescence architecture development of Chrysanthemum lavandulifolium
Article|22 Feb 2024|OPEN

Variation of mesophyll conductance mediated by nitrogen form is related to changes in cell wall property and chloroplast number
Article|19 Feb 2024|OPEN

Dissection of the spatial dynamics of biosynthesis, transport, and turnover of major amino acids in tea plants (Camellia sinensis)
Corrigendum|19 Feb 2024|OPEN

Correction to: PsRGL1 negatively regulates chilling- and gibberellin-induced dormancy release by PsF-box1-mediated targeting for proteolytic degradation in tree peony
Article|17 Feb 2024|OPEN

Multi-omic dissection of the cold resistance traits of white water lily
Article|15 Feb 2024|OPEN

Hypermethylation in the promoter regions of flavonoid pathway genes is associated with skin color fading during ‘Daihong’ apple fruit development
Article|15 Feb 2024|OPEN

TSPO-induced degradation of the ethylene receptor RhETR3 promotes salt tolerance in rose (Rosa hybrida)
Article|15 Feb 2024|OPEN

Transcriptional regulation of flavonol biosynthesis in plants
Method|08 Feb 2024|OPEN

Plant-LncPipe: a computational pipeline providing significant improvement in plant lncRNA identification
Article|06 Feb 2024|OPEN

The chromosome-scale genome and population genomics reveal the adaptative evolution of Populus pruinosa to desertification environment
Article|06 Feb 2024|OPEN

LaMYC7, a positive regulator of linalool and caryophyllene biosynthesis, confers plant resistance to Pseudomonas syringae
Article|02 Feb 2024|OPEN

Genome-wide identification of bHLH transcription factors and functional analysis in salt gland development of the recretohalophyte sea lavender (Limonium bicolor)
Article|02 Feb 2024|OPEN

The Cissus quadrangularis genome reveals its adaptive features in an arid habitat
Article|31 Jan 2024|OPEN

Identification and application of an exocarp-preferential promoter for genetic engineering of tomato fruit
Article|30 Jan 2024|OPEN

T2T reference genome assembly and genome-wide association study reveal the genetic basis of Chinese bayberry fruit quality
Article|30 Jan 2024|OPEN

Lipidomics, transcription analysis, and hormone profiling unveil the role of CsLOX6 in MeJA biosynthesis during black tea processing
Article|30 Jan 2024|OPEN

Apple E3 ligase MdPUB23 mediates ubiquitin-dependent degradation of MdABI5 to delay ABA-triggered leaf senescence
Article|30 Jan 2024|OPEN

Two large inversions seriously suppress recombination and are essential for key genotype fixation in cabbage (Brassica oleracea L. var. capitata)
Article|26 Jan 2024|OPEN

PMAT: an efficient plant mitogenome assembly toolkit using low-coverage HiFi sequencing data
Article|24 Jan 2024|OPEN

Allele-specific DNA methylation and gene expression during shoot organogenesis in tissue culture of hybrid poplar
Article|24 Jan 2024|OPEN

SlWRKY80-mediated jasmonic acid pathway positively regulates tomato resistance to saline–alkali stress by enhancing spermidine content and stabilizing Na+/K+ homeostasis
Article|19 Jan 2024|OPEN

5-Aminolevulinic acid improves cold resistance through regulation of SlMYB4/SlMYB88-SlGSTU43 module to scavenge reactive oxygen species in tomato
Article|17 Jan 2024|OPEN

A haplotype-resolved gap-free genome assembly provides novel insight into monoterpenoid diversification in Mentha suaveolens ‘Variegata’
Article|17 Jan 2024|OPEN

Leguminous green manure intercropping changes the soil microbial community and increases soil nutrients and key quality components of tea leaves
Article|17 Jan 2024|OPEN

Diploid wax apple (Syzygium samarangense) genome identified NAC genes regulating fruit development
Article|16 Jan 2024|OPEN

BL-Hi-C reveals the 3D genome structure of Brassica crops with high sensitivity
Article|16 Jan 2024|OPEN

Insights into the functional role of tomato TM6 as a transcriptional regulator of flower development
Article|16 Jan 2024|OPEN

Genetic regulation of volatile production in two melon introgression line collections with contrasting ripening behavior
Letter to the Editor|16 Jan 2024|OPEN

Efficient targeted mutagenesis in tetraploid Pogostemon cablin by the CRISPR/Cas9-mediated genomic editing system
Article|16 Jan 2024|OPEN

CRISPR/Cas9 revolutionizes Macleaya cordata breeding: a leap in sanguinarine biosynthesis
Article|12 Jan 2024|OPEN

Enhanced photosynthetic efficiency by nitrogen-doped carbon dots via plastoquinone-involved electron transfer in apple
Article|12 Jan 2024|OPEN

The cellular and molecular basis of the spur development in Impatiens uliginosa
Review Article|12 Jan 2024|OPEN

A comprehensive overview of omics-based approaches to enhance biotic and abiotic stress tolerance in sweet potato
Review Article|10 Jan 2024|OPEN

Phenotyping, genetics, and “-omics” approaches to unravel and introgress enhanced resistance against apple scab (Venturia inaequalis) in apple cultivars (Malus × domestica)
Article|10 Jan 2024|OPEN

EasyDAM_V4: Guided-GAN-based cross-species data labeling for fruit detection with significant shape difference
Article|10 Jan 2024|OPEN

Leaf variegation caused by plastome structural variation: an example from Dianella tasmanica
Article|10 Jan 2024|OPEN

DNA methylome analysis reveals novel insights into active hypomethylated regulatory mechanisms of temperature-dependent flower opening in Osmanthus fragrans
Article|10 Jan 2024|OPEN

Towards the completion of Koch's postulates for the citrus huanglongbing bacterium, Candidatus Liberibacter asiaticus
Article|10 Jan 2024|OPEN

Genome and GWAS analysis identified genes significantly related to phenotypic state of Rhododendron bark
Article|10 Jan 2024|OPEN

CsMYB73 negatively regulates theanine accumulation mediated by CsGGT2 and CsGGT4 in tea shoots (Camellia sinensis)
Article|10 Jan 2024|OPEN

Chloroplast C-to-U editing, regulated by a PPR protein BoYgl-2, is important for chlorophyll biosynthesis in cabbage
Article|10 Jan 2024|OPEN

Flowering genes identification, network analysis, and database construction for 837 plants
Article|09 Jan 2024|OPEN

Integration of metabolomics and transcriptomics reveals the regulation mechanism of the phenylpropanoid biosynthesis pathway in insect resistance traits in Solanum habrochaites
Article|09 Jan 2024|OPEN

Cuticular wax biosynthesis in blueberries (Vaccinium corymbosum L.): Transcript and metabolite changes during ripening and storage affect key fruit quality traits
Article|05 Jan 2024|OPEN

The lemon genome and DNA methylome unveil epigenetic regulation of citric acid biosynthesis during fruit development
Article|03 Jan 2024|OPEN

Transgressive segregation, hopeful monsters, and phenotypic selection drove rapid genetic gains and breakthroughs in predictive breeding for quantitative resistance to Macrophomina in strawberry
Article|03 Jan 2024|OPEN

Dissecting the complex genetic basis of pre- and post-harvest traits in Vitis vinifera L. using genome-wide association studies
Article|03 Jan 2024|OPEN

RtNAC055 promotes drought tolerance via a stomatal closure pathway linked to methyl jasmonate/hydrogen peroxide signaling in Reaumuria trigyna
Article|03 Jan 2024|OPEN

A natural mutation in the promoter of the aconitase gene ZjACO3 influences fruit citric acid content in jujube
Article|02 Jan 2024|OPEN

MicroRNA396 negatively regulates shoot regeneration in tomato
Article|02 Jan 2024|OPEN

miR156b-targeted VvSBP8/13 functions downstream of the abscisic acid signal to regulate anthocyanins biosynthesis in grapevine fruit under drought
Article|02 Jan 2024|OPEN

Exploring large-scale gene coexpression networks in peach (Prunus persica L.): a new tool for predicting gene function
Review Article|02 Jan 2024|OPEN

Advanced metabolic engineering strategies for increasing artemisinin yield in Artemisia annua L.
Letter to the Editor|02 Jan 2024|OPEN

Haplotype-resolved genome assembly of Corydalis yanhusuo, a traditional Chinese medicine with unusual telomere motif
Article|29 Dec 2023|OPEN

NYUS.2: an automated machine learning prediction model for the large-scale real-time simulation of grapevine freezing tolerance in North America
Article|29 Dec 2023|OPEN

MdSnRK1.1 interacts with MdGLK1 to regulate abscisic acid-mediated chlorophyll accumulation in apple
Article|29 Dec 2023|OPEN

IAA-miR164a-NAC100L1 module mediates symbiotic incompatibility of cucumber/pumpkin grafted seedlings through regulating callose deposition
Article|29 Dec 2023|OPEN

CsMLO8/11 are required for full susceptibility of cucumber stem to powdery mildew and interact with CsCRK2 and CsRbohD
Letter to the Editor|29 Dec 2023|OPEN

Tissue culture-free transformation of traditional Chinese medicinal plants with root suckering capability
Article|29 Dec 2023|OPEN

mRNA-miRNA analyses reveal the involvement of CsbHLH1 and miR1446a in the regulation of caffeine biosynthesis in Camellia sinensis
Article|29 Dec 2023|OPEN

Exploring N6-methyladenosine (m6A) modification in tree species: opportunities and challenges
Article|29 Dec 2023|OPEN

AlliumDB: a central portal for comparative and functional genomics in Allium
Article|28 Dec 2023|OPEN

Phased genomics reveals hidden somatic mutations and provides insight into fruit development in sweet orange
Article|28 Dec 2023|OPEN

Lskipk Lsatpase double mutants are necessary and sufficient for the compact plant architecture of butterhead lettuce
Article|23 Dec 2023|OPEN

ABA-CsABI5-CsCalS11 module upregulates Callose deposition of citrus infected with Candidatus Liberibacter asiaticus
Article|21 Dec 2023|OPEN

Strawberry soluble solids QTL with inverse effects on yield
Article|21 Dec 2023|OPEN

DataColor: unveiling biological data relationships through distinctive color mapping
Article|19 Dec 2023|OPEN

A chromosome-level genome assembly of Agave hybrid NO.11648 provides insights into the CAM photosynthesis
Article|19 Dec 2023|OPEN

A QTL of eggplant shapes the rhizosphere bacterial community, co-responsible for resistance to bacterial wilt
Article|19 Dec 2023|OPEN

Insights into the Superrosids phylogeny and flavonoid synthesis from the telomere-to-telomere gap-free genome assembly of Penthorum chinense Pursh
Article|19 Dec 2023|OPEN

A 49-bp deletion of PmAP2L results in a double flower phenotype in Prunus mume
Article|19 Dec 2023|OPEN

Genomic analysis of fruit size and shape traits in apple: unveiling candidate genes through GWAS analysis
Review Article|19 Dec 2023|OPEN

Deciphering the intricate hierarchical gene regulatory network: unraveling multi-level regulation and modifications driving secondary cell wall formation
Article|19 Dec 2023|OPEN

Genome variation and LTR-RT analyses of an ancient peach landrace reveal mechanism of blood-flesh fruit color formation and fruit maturity date advancement
Article|19 Dec 2023|OPEN

A metabolomics study in citrus provides insight into bioactive phenylpropanoid metabolism
Method|19 Dec 2023|OPEN

RNA virus-mediated gene editing for tomato trait breeding
Article|18 Dec 2023|OPEN

Gibberellins involved in fruit ripening and softening by mediating multiple hormonal signals in tomato
Article|13 Dec 2023|OPEN

A highly diversified NLR cluster in melon contains homologs that confer powdery mildew and aphid resistance
Article|13 Dec 2023|OPEN

A telomere-to-telomere reference genome of ficus (Ficus hispida) provides new insights into sex determination
Article|13 Dec 2023|OPEN

A biosynthetic network for protoberberine production in Coptis chinensis
Article|13 Dec 2023|OPEN

Telomere-to-telomere and gap-free genome assembly of a susceptible grapevine species (Thompson Seedless) to facilitate grape functional genomics
Article|13 Dec 2023|OPEN

An efficient protoplast-based genome editing protocol for Vitis species
Article|13 Dec 2023|OPEN

A Ca2+ sensor BraCBL1.2 involves in BraCRa-mediated clubroot resistance in Chinese cabbage
Article|13 Dec 2023|OPEN

Comprehensive dissection of variation and accumulation of free amino acids in tea accessions
Article|11 Dec 2023|OPEN

Efficient and heritable A-to-K base editing in rice and tomato
Article|11 Dec 2023|OPEN

Populus cathayana genome and population resequencing provide insights into its evolution and adaptation
Article|11 Dec 2023|OPEN

The Botrytis cinerea effector BcXYG1 suppresses immunity in Fragaria vesca by targeting FvBPL4 and FvACD11
Article|05 Dec 2023|OPEN

Phosphate deficiency induced by infection promotes synthesis of anthracnose-resistant anthocyanin-3-O-galactoside phytoalexins in the Camellia sinensis plant
Article|28 Nov 2023|OPEN

Signalling mechanisms and agricultural applications of (Z)-3-hexenyl butyrate-mediated stomatal closure
Article|28 Nov 2023|OPEN

Vacuolar proteomic analysis reveals tonoplast transporters for accumulation of citric acid and sugar in citrus fruit
Article|27 Nov 2023|OPEN

A putative E3 ubiquitin ligase substrate receptor degrades transcription factor SmNAC to enhance bacterial wilt resistance in eggplant
Article|27 Nov 2023|OPEN

The haplotype-resolved telomere-to-telomere carnation (Dianthus caryophyllus) genome reveals the correlation between genome architecture and gene expression
Article|27 Nov 2023|OPEN

MODMS: a multi-omics database for facilitating biological studies on alfalfa (Medicago sativa L.)
Article|27 Nov 2023|OPEN

Phased gap-free genome assembly of octoploid cultivated strawberry illustrates the genetic and epigenetic divergence among subgenomes
Article|27 Nov 2023|OPEN

Construction of a high-density genetic map for yardlong bean and identification of ANT1 as a regulator of anthocyanin biosynthesis
Article|27 Nov 2023|OPEN

A LlWRKY33-LlHSFA4-LlCAT2 module confers resistance to Botrytis cinerea in lily
Article|27 Nov 2023|OPEN

Nitrogen–potassium balance improves leaf photosynthetic capacity by regulating leaf nitrogen allocation in apple
Method|26 Nov 2023|OPEN

Tracking organelle activities through efficient and stable root genetic transformation system in woody plants
Article|22 Nov 2023|OPEN

Genome-wide association analysis identifies a candidate gene controlling seed size and yield in Xanthoceras sorbifolium Bunge
Article|20 Nov 2023|OPEN

Two transcription factors, AcREM14 and AcC3H1, enhance the resistance of kiwifruit Actinidiachinensis var. chinensis to Pseudomonas syringae pv. actinidiae
Article|17 Nov 2023|OPEN

ERF5.1 modulates carotenoid accumulation by interacting with CCD4.1 in Lycium
Article|17 Nov 2023|OPEN

The red/far-red light photoreceptor FvePhyB regulates tissue elongation and anthocyanin accumulation in woodland strawberry
Article|17 Nov 2023|OPEN

Gap-free genome assembly and CYP450 gene family analysis reveal the biosynthesis of anthocyanins in Scutellaria baicalensis
Review Article|17 Nov 2023|OPEN

LncRNAs exert indispensable roles in orchestrating the interaction among diverse noncoding RNAs and enrich the regulatory network of plant growth and its adaptive environmental stress response
Article|17 Nov 2023|OPEN

Development of virus-induced genome editing methods in Solanaceous crops
Article|17 Nov 2023|OPEN

CsMYB67 participates in the flavonoid biosynthesis of summer tea leaves
Article|16 Nov 2023|OPEN

Light quality regulates plant biomass and fruit quality through a photoreceptor-dependent HY5-LHC/CYCB module in tomato
Article|14 Nov 2023|OPEN

Gene editing of authentic Brassica rapa flavonol synthase 1 generates dihydroflavonol-accumulating Chinese cabbage
Article|14 Nov 2023|OPEN

Rosaceae fruit transcriptome database (ROFT)—a useful genomic resource for comparing fruits of apple, peach, strawberry, and raspberry
Article|14 Nov 2023|OPEN

Genetic architecture and genomic prediction of plant height-related traits in chrysanthemum
Article|14 Nov 2023|OPEN

Integrated proteomic analysis reveals interactions between phosphorylation and ubiquitination in rose response to Botrytis infection
Article|13 Nov 2023|OPEN

Multi-omics landscape to decrypt the distinct flavonoid biosynthesis of Scutellaria baicalensis across multiple tissues
Article|10 Nov 2023|OPEN

High-quality assembly and methylome of a Tibetan wild tree peony genome (Paeonia ludlowii) reveal the evolution of giant genome architecture
Article|09 Nov 2023|OPEN

Two haplotype-resolved genomes reveal important flower traits in bigleaf hydrangea (Hydrangea macrophylla) and insights into Asterid evolution
Article|09 Nov 2023|OPEN

The dynamic arms race during the early invasion of woodland strawberry by Botrytis cinerea revealed by dual dense high-resolution RNA-seq analyses
Article|08 Nov 2023|OPEN

Uncovering the miRNA-mediated regulatory network involved in Ma bamboo (Dendrocalamus latiflorus) de novo shoot organogenesis
Article|08 Nov 2023|OPEN

Characterization of PetM cytochrome b6f subunit 7 domain-containing protein in tomato
Article|08 Nov 2023|OPEN

Physiological and molecular bases of the boron deficiency response in tomatoes
Article|08 Nov 2023|OPEN

Berry texture QTL and candidate gene analysis in grape (Vitis vinifera L.)
Article|08 Nov 2023|OPEN

Promoter insertion leads to polyembryony in mango — a case of convergent evolution with citrus
Article|08 Nov 2023|OPEN

StSN2 interacts with the brassinosteroid signaling suppressor StBIN2 to maintain tuber dormancy
Article|07 Nov 2023|OPEN

Function identification of miR159a, a positive regulator during poplar resistance to drought stress
Article|06 Nov 2023|OPEN

Diverse O-methyltransferases catalyze the biosynthesis of floral benzenoids that repel aphids from the flowers of waterlily Nymphaea prolifera
Article|27 Oct 2023|OPEN

Genomic evidence for evolutionary history and local adaptation of two endemic apricots: Prunus hongpingensis and P. zhengheensis
Article|27 Oct 2023|OPEN

Establishment of new convenient two-line system for hybrid production by targeting mutation of OPR3 in allopolyploid Brassica napus
Article|25 Oct 2023|OPEN

Cucumber malate decarboxylase, CsNADP-ME2, functions in the balance of carbon and amino acid metabolism in fruit
Article|25 Oct 2023|OPEN

The haplotype-resolved autotetraploid genome assembly provides insights into the genomic evolution and fruit divergence in wax apple (Syzygium samarangense (Blume) Merr. and Perry)
Review Article|27 Sep 2023|OPEN

Network of GRAS transcription factors in plant development, fruit ripening and stress responses
Corrigendum|13 Jun 2023|OPEN

Correction to: A high-quality Bougainvillea genome provides new insights into evolutionary history and pigment biosynthetic pathways in the Caryophyllales
Article|22 Jul 2022|OPEN

Correction to: HsfA1a confers pollen thermotolerance through upregulating antioxidant capacity, protein repair, and degradation in Solanum lycopersicum L.