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Article|29 Dec 2023|OPEN
NYUS.2: an automated machine learning prediction model for the large-scale real-time simulation of grapevine freezing tolerance in North America
Hongrui Wang1 , , Gaurav D. Moghe2 , Al P. Kovaleski3 , Markus Keller4 , Timothy E. Martinson1 , A. Harrison Wright5 , Jeffrey L. Franklin5 , Andréanne Hébert-Haché6 , Caroline Provost6 , Michael Reinke7 , Amaya Atucha3 , Michael G. North3 , Jennifer P. Russo1 , Pierre Helwi8 , Michela Centinari9 and Jason P. Londo,1 ,
1School of Integrative Plant Science, Horticulture Section, Cornell AgriTech, Cornell University, Geneva, NY 14456, USA
2School of Integrative Plant Science, Plant Biology Section, Cornell University, Ithaca, NY 14850, USA
3Plant and Agroecosystem Sciences Department, University of Wisconsin–Madison, Madison, WI 53706, USA
4Department of Viticulture and Enology, Irrigated Agriculture Research and Extension Center, Washington State University, Prosser, WA 99350, USA
5Kentville Research and Development Centre, Agriculture and Agri-Food Canada, Kentville, Nova Scotia, B4N 1J5, Canada
6Centre de Recherche Agroalimentaire de Mirabel, Mirabel, Québec, J7N 2X8, Canada
7Southwest Michigan Research and Extension Center, Michigan State University, Benton Harbor, MI 49022, USA
8Martell & Co., 7 place Edouard Martell, Cognac 16100, France
9Department of Plant Science, The Pennsylvania State University, University Park, PA 16802, USA
*Corresponding author. E-mail: hw692@cornell.edu,jpl275@cornell.edu

Horticulture Research 11,
Article number: uhad286 (2024)
doi: https://doi.org/10.1093/hr/uhad286
Views: 425

Received: 28 Aug 2023
Accepted: 17 Dec 2023
Published online: 29 Dec 2023

Abstract

Accurate and real-time monitoring of grapevine freezing tolerance is crucial for the sustainability of the grape industry in cool climate viticultural regions. However, on-site data are limited due to the complexity of measurement. Current prediction models underperform under diverse climate conditions, which limits the large-scale deployment of these methods. We combined grapevine freezing tolerance data from multiple regions in North America and generated a predictive model based on hourly temperature-derived features and cultivar features using AutoGluon, an automated machine learning engine. Feature importance was quantified by AutoGluon and SHAP (SHapley Additive exPlanations) value. The final model was evaluated and compared with previous models for its performance under different climate conditions. The final model achieved an overall 1.36°C root-mean-square error during model testing and outperformed two previous models using three test cultivars at all testing regions. Two feature importance quantification methods identified five shared essential features. Detailed analysis of the features indicates that the model has adequately extracted some biological mechanisms during training. The final model, named NYUS.2, was deployed along with two previous models as an R shiny-based application in the 2022–23 dormancy season, enabling large-scale and real-time simulation of grapevine freezing tolerance in North America for the first time.